STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DSY1222Hypothetical protein; Similarity to COG0436 PLP-dependent aminotransferases(Evalue: 1E-79). (398 aa)    
Predicted Functional Partners:
DSY4385
Hypothetical protein; Similarity to COG0069 Glutamate synthase domain 2(Evalue: 0).
  
 
 0.955
mdh
Hypothetical protein; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family.
  
 0.941
pheA
Hypothetical protein; Similarity to COG0077 Prephenate dehydratase(Evalue: 8E-43).
 
 
 0.927
argG
Hypothetical protein; Similarity to COG0137 Argininosuccinate synthase(Evalue: 1E-134); Belongs to the argininosuccinate synthase family. Type 1 subfamily.
  
 0.921
purA
Hypothetical protein; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.
  
 0.918
DSY0320
Hypothetical protein; Similarity to COG0388 Predicted amidohydrolase(Evalue: 3E-29).
  
 
 0.914
DSY1356
Hypothetical protein; Similarity to COG0031 Cysteine synthase(Evalue: 1E-103).
  
 0.914
DSY4189
Hypothetical protein; Similarity to COG0031 Cysteine synthase(Evalue: 1E-111).
  
 0.914
DSY1929
Hypothetical protein; Similarity to COG1246 N-acetylglutamate synthase and related acetyltransferases(Evalue: 2E-41); Belongs to the acetyltransferase family.
  
  
  0.913
DSY4953
Hypothetical protein; Similarity to COG0334 Glutamate dehydrogenase/leucine dehydrogenase(Evalue: 1E-177); Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
  
 
 0.913
Your Current Organism:
Desulfitobacterium hafniense
NCBI taxonomy Id: 138119
Other names: D. hafniense Y51, Desulfitobacterium hafniense Y51, Desulfitobacterium hafniense str. Y51, Desulfitobacterium hafniense strain Y51, Desulfitobacterium sp. Y51
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.