STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DSY1407Hypothetical protein. (83 aa)    
Predicted Functional Partners:
DSY1406
Hypothetical protein.
       0.689
DSY2654
Hypothetical protein; Similarity to COG1595 DNA-directed RNA polymerase specialized sigma subunits, sigma24 homologs; Belongs to the sigma-70 factor family. ECF subfamily.
  
     0.626
thiE
Hypothetical protein; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family.
       0.557
DSY1405
Hypothetical protein; Similarity to COG0351 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase(Evalue: 3E-69).
       0.548
thiM
Hypothetical protein; Catalyzes the phosphorylation of the hydroxyl group of 4- methyl-5-beta-hydroxyethylthiazole (THZ); Belongs to the Thz kinase family.
       0.543
DSY1404
Hypothetical protein.
       0.543
DSY1408
Hypothetical protein; Similarity to COG0789 Predicted transcriptional regulators.
       0.507
DSY1080
Hypothetical protein; Similarity to COG0845 Membrane-fusion protein.
  
   
 0.490
DSY0109
Hypothetical protein; Similarity to COG3689 Predicted membrane protein.
  
     0.487
DSY1081
Hypothetical protein.
  
     0.431
Your Current Organism:
Desulfitobacterium hafniense
NCBI taxonomy Id: 138119
Other names: D. hafniense Y51, Desulfitobacterium hafniense Y51, Desulfitobacterium hafniense str. Y51, Desulfitobacterium hafniense strain Y51, Desulfitobacterium sp. Y51
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.