STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DSY1492Hypothetical protein; Similarity to COG0827 Adenine-specific DNA methylase(Evalue: 2E-48). (519 aa)    
Predicted Functional Partners:
DSY2998
Hypothetical protein; Similarity to COG1334 Uncharacterized flagellar protein FlaG.
  
 
   0.511
lexA
Hypothetical protein; Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair.
 
  
 0.436
guaA
Hypothetical protein; Catalyzes the synthesis of GMP from XMP.
     
 0.435
DSY0676
Hypothetical protein.
  
    0.424
DSY0147
Hypothetical protein; Similarity to COG3177 Uncharacterized BCR(Evalue: 3E-34).
 
 
   0.414
DSY0686
Hypothetical protein.
  
  
 0.414
DSY4637
Hypothetical protein; Similarity to COG3593 Predicted ATP-dependent endonuclease of the OLD family(Evalue: 1E-35).
  
  
 0.414
DSY0680
Hypothetical protein; Similarity to COG0466 ATP-dependent Lon protease, bacterial type.
  
    0.413
DSY4809
Hypothetical protein; Similarity to COG1196 Chromosome segregation ATPases.
  
    0.408
Your Current Organism:
Desulfitobacterium hafniense
NCBI taxonomy Id: 138119
Other names: D. hafniense Y51, Desulfitobacterium hafniense Y51, Desulfitobacterium hafniense str. Y51, Desulfitobacterium hafniense strain Y51, Desulfitobacterium sp. Y51
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.