STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DSY1570Hypothetical protein; Similarity to COG2057 Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit(Evalue: 7E-29). (254 aa)    
Predicted Functional Partners:
DSY1569
Hypothetical protein; Similarity to COG1788 Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit(Evalue: 1E-40).
 0.999
DSY3369
Hypothetical protein; Similarity to COG1250 3-Hydroxyacyl-CoA dehydrogenase(Evalue: 1E-133).
  
 
 0.660
DSY1567
Hypothetical protein; Similarity to COG0183 Acetyl-CoA acetyltransferases(Evalue: 1E-101); Belongs to the thiolase-like superfamily. Thiolase family.
  
  
 0.559
DSY1712
Hypothetical protein; Similarity to COG1584 Predicted membrane protein.
  
     0.541
DSY2485
Hypothetical protein; Similarity to COG0183 Acetyl-CoA acetyltransferases(Evalue: 8E-26); Belongs to the thiolase-like superfamily. Thiolase family.
 
  
 0.508
DSY2366
Biotin carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.
  
 
 0.499
DSY1568
Hypothetical protein; Similarity to COG1960 Acyl-CoA dehydrogenases(Evalue: 1E-109).
  
  
 0.498
DSY1566
Hypothetical protein; Similarity to COG1250 3-Hydroxyacyl-CoA dehydrogenase(Evalue: 1E-108).
  
  
 0.432
Your Current Organism:
Desulfitobacterium hafniense
NCBI taxonomy Id: 138119
Other names: D. hafniense Y51, Desulfitobacterium hafniense Y51, Desulfitobacterium hafniense str. Y51, Desulfitobacterium hafniense strain Y51, Desulfitobacterium sp. Y51
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.