STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DSY1650Ferredoxin; Similarity to COG0633 Ferredoxin. (638 aa)    
Predicted Functional Partners:
DSY1651
Similarity to COG1456 CO dehydrogenase/acetyl-CoA synthase gamma subunit (corrinoid Fe-S protein)(Evalue: 3E-85).
 
 
 0.971
DSY1648
Similarity to COG2069 CO dehydrogenase/acetyl-CoA synthase delta subunit (corrinoid Fe-S protein)(Evalue: 7E-52).
 
 
 
 0.969
DSY1649
Similarity to COG3640 CO dehydrogenase maturation factor(Evalue: 2E-59).
 
   
 0.915
DSY1652
Similarity to COG1614 CO dehydrogenase/acetyl-CoA synthase beta subunit(Evalue: 1E-109).
 
     0.896
DSY1654
Similarity to COG3640 CO dehydrogenase maturation factor(Evalue: 4E-44).
 
   
 0.776
DSY1653
Carbon monoxide dehydrogenase/acetyl-CoA synthase beta subunit; Similarity to COG1151 6Fe-6S prismane cluster-containing protein(Evalue: 1E-79).
 
   
 0.752
DSY3648
Hypothetical protein; Belongs to the trimethylamine methyltransferase family.
 
     0.730
mtgB
Hypothetical protein; Methyltransferase able to methylate free cob(I)alamin in vitro, using glycine betaine as the methyl donor, yealding methylcobalamin (methylCbl) and dimethylglycine. In vivo, probably carries out the methylation of a corrinoid protein, likely the adjacently encoded DSY3155, with glycine betaine, to then supply methyl groups to tetrahydrofolate (THF) for ultimate conversion to carbon dioxide; oxidation of the methyl group would also provide reducing equivalents for anaerobic respiration. Thus, may function in the pathway that allows anaerobic methylotrophic growth o [...]
 
     0.720
DSY4971
Hypothetical protein; Belongs to the trimethylamine methyltransferase family.
 
     0.720
DSY2558
Hypothetical protein.
 
     0.680
Your Current Organism:
Desulfitobacterium hafniense
NCBI taxonomy Id: 138119
Other names: D. hafniense Y51, Desulfitobacterium hafniense Y51, Desulfitobacterium hafniense str. Y51, Desulfitobacterium hafniense strain Y51, Desulfitobacterium sp. Y51
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