STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DSY1908Hypothetical protein; Similarity to COG0252 L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D(Evalue: 3E-65). (327 aa)    
Predicted Functional Partners:
DSY3182
Hypothetical protein; Similarity to COG1027 Aspartate ammonia-lyase(Evalue: 0).
 
 
 0.971
DSY4104
Hypothetical protein; Similarity to COG1794 Aspartate racemase(Evalue: 3E-73); Belongs to the aspartate/glutamate racemases family.
    
 0.916
DSY4329
Hypothetical protein; Similarity to COG0367 Asparagine synthase (glutamine-hydrolyzing)(Evalue: 1E-149).
     
 0.916
argG
Hypothetical protein; Similarity to COG0137 Argininosuccinate synthase(Evalue: 1E-134); Belongs to the argininosuccinate synthase family. Type 1 subfamily.
  
 
 0.914
DSY1222
Hypothetical protein; Similarity to COG0436 PLP-dependent aminotransferases(Evalue: 1E-79).
    
 0.910
nadB
L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate.
   
 
 0.903
pyrB
Hypothetical protein; Similarity to COG0540 Aspartate carbamoyltransferase, catalytic chain(Evalue: 1E-80); Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.
    
 0.902
purA
Hypothetical protein; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.
     
  0.900
panD
Hypothetical protein; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine.
    
 0.849
DSY0374
Hypothetical protein; Similarity to COG3473 Maleate cis-trans isomerase(Evalue: 8E-26).
 
  
  0.835
Your Current Organism:
Desulfitobacterium hafniense
NCBI taxonomy Id: 138119
Other names: D. hafniense Y51, Desulfitobacterium hafniense Y51, Desulfitobacterium hafniense str. Y51, Desulfitobacterium hafniense strain Y51, Desulfitobacterium sp. Y51
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