Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
glkHypothetical protein; Similarity to COG0837 Glucokinase(Evalue: 8E-54); Belongs to the bacterial glucokinase family. (362 aa)    
Predicted Functional Partners:
pgi
Hypothetical protein; Similarity to COG0166 Glucose-6-phosphate isomerase(Evalue: 1E-152).
    
 0.932
DSY1669
Hypothetical protein; Similarity to COG1109 Phosphomannomutase(Evalue: 1E-142).
    
 0.915
DSY2921
Hypothetical protein; Similarity to COG3250 Beta-galactosidase/beta-glucuronidase.
     
 0.915
tal
Hypothetical protein; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 3B subfamily.
    
 0.861
DSY4939
Hypothetical protein; Similarity to COG0191 Fructose/tagatose bisphosphate aldolase(Evalue: 1E-74).
     
 0.829
deoC
Hypothetical protein; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily.
     
  0.800
DSY4867
Hypothetical protein; Similarity to COG0021 Transketolase(Evalue: 1E-84).
     
  0.800
DSY4868
Hypothetical protein; Similarity to COG0021 Transketolase(Evalue: 3E-83).
     
  0.800
guaA
Hypothetical protein; Catalyzes the synthesis of GMP from XMP.
  
    0.606
pyk
Similarity to COG0469 Pyruvate kinase(Evalue: 1E-148).
 
   
 0.575
Your Current Organism:
Desulfitobacterium hafniense
NCBI taxonomy Id: 138119
Other names: D. hafniense Y51, Desulfitobacterium hafniense Y51, Desulfitobacterium hafniense str. Y51, Desulfitobacterium hafniense strain Y51, Desulfitobacterium sp. Y51
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