STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DSY2016Hypothetical protein; Similarity to COG1136 ABC-type transport systems, involved in lipoprotein release, ATPase components(Evalue: 2E-49). (202 aa)    
Predicted Functional Partners:
DSY3618
Hypothetical protein; Similarity to COG0577 ABC-type transport systems, involved in lipoprotein release, permease components(Evalue: 4E-59).
 
 0.955
DSY3655
Hypothetical protein; Similarity to COG0577 ABC-type transport systems, involved in lipoprotein release, permease components(Evalue: 9E-81).
 
 0.955
DSY3824
Hypothetical protein; Similarity to COG0577 ABC-type transport systems, involved in lipoprotein release, permease components(Evalue: 4E-70).
 
 0.955
DSY2017
Hypothetical protein.
       0.779
DSY1352
Hypothetical protein; Similarity to COG1136 ABC-type transport systems, involved in lipoprotein release, ATPase components.
  
     0.725
DSY3125
Hypothetical protein.
  
     0.659
DSY4229
Hypothetical protein; Similarity to COG1131 ABC-type multidrug transport system, ATPase component.
 
   
 0.655
DSY3994
Hypothetical protein; Similarity to COG0577 ABC-type transport systems, involved in lipoprotein release, permease components(Evalue: 8E-33).
 
 
 0.644
DSY0536
Hypothetical protein; Similarity to COG0577 ABC-type transport systems, involved in lipoprotein release, permease components(Evalue: 7E-26).
 
 0.555
DSY3993
Hypothetical protein; Similarity to COG0577 ABC-type transport systems, involved in lipoprotein release, permease components.
  
 
 0.520
Your Current Organism:
Desulfitobacterium hafniense
NCBI taxonomy Id: 138119
Other names: D. hafniense Y51, Desulfitobacterium hafniense Y51, Desulfitobacterium hafniense str. Y51, Desulfitobacterium hafniense strain Y51, Desulfitobacterium sp. Y51
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.