STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DSY2022Hypothetical protein; Similarity to COG1136 ABC-type transport systems, involved in lipoprotein release, ATPase components(Evalue: 1E-61). (216 aa)    
Predicted Functional Partners:
DSY3655
Hypothetical protein; Similarity to COG0577 ABC-type transport systems, involved in lipoprotein release, permease components(Evalue: 9E-81).
 
 0.984
DSY3824
Hypothetical protein; Similarity to COG0577 ABC-type transport systems, involved in lipoprotein release, permease components(Evalue: 4E-70).
 
 0.984
DSY3618
Hypothetical protein; Similarity to COG0577 ABC-type transport systems, involved in lipoprotein release, permease components(Evalue: 4E-59).
 
 0.983
DSY3994
Hypothetical protein; Similarity to COG0577 ABC-type transport systems, involved in lipoprotein release, permease components(Evalue: 8E-33).
 
 0.848
DSY2023
Hypothetical protein.
 
   
 0.835
DSY0536
Hypothetical protein; Similarity to COG0577 ABC-type transport systems, involved in lipoprotein release, permease components(Evalue: 7E-26).
 
 0.811
DSY2024
Hypothetical protein.
       0.773
DSY1352
Hypothetical protein; Similarity to COG1136 ABC-type transport systems, involved in lipoprotein release, ATPase components.
  
     0.768
DSY3993
Hypothetical protein; Similarity to COG0577 ABC-type transport systems, involved in lipoprotein release, permease components.
 
 0.686
DSY3620
Hypothetical protein; Similarity to COG0845 Membrane-fusion protein.
 
 
 0.677
Your Current Organism:
Desulfitobacterium hafniense
NCBI taxonomy Id: 138119
Other names: D. hafniense Y51, Desulfitobacterium hafniense Y51, Desulfitobacterium hafniense str. Y51, Desulfitobacterium hafniense strain Y51, Desulfitobacterium sp. Y51
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.