STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DSY2071Hypothetical protein. (225 aa)    
Predicted Functional Partners:
DSY2070
Hypothetical protein; Similarity to COG1309 Transcriptional regulator.
       0.512
DSY2068
Hypothetical protein; Similarity to COG0841 Cation/multidrug efflux pump(Evalue: 1E-115); Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
       0.491
DSY2069
Hypothetical protein; Similarity to COG0845 Membrane-fusion protein(Evalue: 7E-26); Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
       0.491
DSY2072
Hypothetical protein; Similarity to COG0550 Topoisomerase IA(Evalue: 1E-100).
       0.410
Your Current Organism:
Desulfitobacterium hafniense
NCBI taxonomy Id: 138119
Other names: D. hafniense Y51, Desulfitobacterium hafniense Y51, Desulfitobacterium hafniense str. Y51, Desulfitobacterium hafniense strain Y51, Desulfitobacterium sp. Y51
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