STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
derHypothetical protein; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family. (441 aa)    
Predicted Functional Partners:
cmk
Hypothetical protein; Similarity to COG0283 Cytidylate kinase(Evalue: 2E-55).
  
 0.990
gpsA
Hypothetical protein; Similarity to COG0240 Glycerol 3-phosphate dehydrogenase(Evalue: 2E-95); Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.
 
  
 0.986
DSY2252
Hypothetical protein; Similarity to COG1625 Fe-S oxidoreductase, related to NifB/MoaA family(Evalue: 6E-86).
 
  
 0.956
DSY2280
Hypothetical protein; Similarity to COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases(Evalue: 1E-59); Belongs to the pseudouridine synthase RsuA family.
 
  
 0.905
plsY2
Hypothetical protein; Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP.
       0.805
ftsY
Hypothetical protein; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC).
 
   
 0.784
ffh
Hypothetical protein; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Belongs to the GTP-binding SRP family. SRP54 subfamily.
 
  
 0.783
DSY2253
Hypothetical protein.
       0.773
DSY2254
Hypothetical protein; Similarity to COG0772 Bacterial cell division membrane protein(Evalue: 3E-70); Belongs to the SEDS family.
  
    0.719
gmk
Hypothetical protein; Essential for recycling GMP and indirectly, cGMP.
 
  
 0.704
Your Current Organism:
Desulfitobacterium hafniense
NCBI taxonomy Id: 138119
Other names: D. hafniense Y51, Desulfitobacterium hafniense Y51, Desulfitobacterium hafniense str. Y51, Desulfitobacterium hafniense strain Y51, Desulfitobacterium sp. Y51
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.