STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DSY2411Hypothetical protein; Similarity to COG1459 General secretory pathway protein F(Evalue: 2E-57). (401 aa)    
Predicted Functional Partners:
DSY2412
Hypothetical protein; Similarity to COG2804 Predicted ATPases involved in pili biogenesis, PilB homologs(Evalue: 1E-126).
 
 0.977
DSY2386
Hypothetical protein; Similarity to COG2804 Predicted ATPases involved in pili biogenesis, PilB homologs(Evalue: 1E-119).
 
 0.950
DSY2410
Hypothetical protein; Similarity to COG2165 General secretory pathway proteins G and H and related periplasmic/secreted proteins.
 
  
 0.916
DSY2385
Hypothetical protein; Similarity to COG2805 Predicted ATPases involved in pili biogenesis, PilT homologs(Evalue: 2E-95).
  
 0.881
DSY2382
Hypothetical protein; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.
 
  
 0.875
DSY2389
Hypothetical protein; Similarity to COG2165 General secretory pathway proteins G and H and related periplasmic/secreted proteins.
 
  
 0.837
DSY2413
Hypothetical protein; Similarity to COG2165 General secretory pathway proteins G and H and related periplasmic/secreted proteins.
 
  
 0.806
DSY3147
Hypothetical protein; Similarity to COG2333 Predicted hydrolases of metallo-beta-lactamase fold(Evalue: 4E-33).
  
  
 0.694
DSY2383
Hypothetical protein; Similarity to COG2165 General secretory pathway proteins G and H and related periplasmic/secreted proteins.
 
  
 0.653
DSY3148
Similarity to COG1555 DNA uptake protein and related DNA-binding proteins.
  
  
 0.653
Your Current Organism:
Desulfitobacterium hafniense
NCBI taxonomy Id: 138119
Other names: D. hafniense Y51, Desulfitobacterium hafniense Y51, Desulfitobacterium hafniense str. Y51, Desulfitobacterium hafniense strain Y51, Desulfitobacterium sp. Y51
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.