STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DSY2425Hypothetical protein; Similarity to COG0822 NifU homologs involved in Fe-S cluster formation(Evalue: 2E-44). (127 aa)    
Predicted Functional Partners:
iscS
Hypothetical protein; Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. NifS/IscS subfamily.
 
 0.999
mnmA
Hypothetical protein; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34.
 
  
 0.956
DSY2051
Hypothetical protein; Similarity to COG0316 Uncharacterized ACR; Belongs to the HesB/IscA family.
 
 
 0.934
DSY0801
Hypothetical protein; Similarity to COG0520 Selenocysteine lyase(Evalue: 1E-56).
  
 
 0.884
DSY0869
Hypothetical protein; Similarity to COG1975 Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family(Evalue: 4E-70).
  
 
 0.884
DSY2744
Hypothetical protein; Similarity to COG0520 Selenocysteine lyase(Evalue: 2E-59).
  
 
 0.884
DSY4140
Hypothetical protein; Similarity to COG0520 Selenocysteine lyase(Evalue: 9E-79).
  
 
 0.884
DSY4280
Hypothetical protein; Similarity to COG0520 Selenocysteine lyase(Evalue: 4E-83).
  
 
 0.884
DSY2427
Hypothetical protein; Similarity to COG1959 Predicted transcriptional regulator(Evalue: 1E-35).
 
  
 0.858
dnaK
Hypothetical protein; Acts as a chaperone; Belongs to the heat shock protein 70 family.
 
 0.821
Your Current Organism:
Desulfitobacterium hafniense
NCBI taxonomy Id: 138119
Other names: D. hafniense Y51, Desulfitobacterium hafniense Y51, Desulfitobacterium hafniense str. Y51, Desulfitobacterium hafniense strain Y51, Desulfitobacterium sp. Y51
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.