STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DSY2440Hypothetical protein; Similarity to COG1595 DNA-directed RNA polymerase specialized sigma subunits, sigma24 homologs(Evalue: 6E-35); Belongs to the sigma-70 factor family. ECF subfamily. (174 aa)    
Predicted Functional Partners:
DSY1999
Hypothetical protein; Similarity to COG1595 DNA-directed RNA polymerase specialized sigma subunits, sigma24 homologs; Belongs to the sigma-70 factor family. ECF subfamily.
  
     0.761
DSY0612
Hypothetical protein; Similarity to COG1595 DNA-directed RNA polymerase specialized sigma subunits, sigma24 homologs; Belongs to the sigma-70 factor family. ECF subfamily.
  
     0.760
DSY1734
Hypothetical protein; Similarity to COG1595 DNA-directed RNA polymerase specialized sigma subunits, sigma24 homologs; Belongs to the sigma-70 factor family. ECF subfamily.
  
     0.753
DSY4224
Hypothetical protein; Similarity to COG1595 DNA-directed RNA polymerase specialized sigma subunits, sigma24 homologs(Evalue: 1E-21); Belongs to the sigma-70 factor family. ECF subfamily.
  
     0.751
DSY2439
Hypothetical protein.
       0.749
DSY1339
Hypothetical protein; Similarity to COG1595 DNA-directed RNA polymerase specialized sigma subunits, sigma24 homologs; Belongs to the sigma-70 factor family. ECF subfamily.
  
     0.715
DSY0892
Hypothetical protein; Similarity to COG1595 DNA-directed RNA polymerase specialized sigma subunits, sigma24 homologs; Belongs to the sigma-70 factor family. ECF subfamily.
  
     0.711
DSY2329
Hypothetical protein; Similarity to COG0500 SAM-dependent methyltransferases; Belongs to the sigma-70 factor family. ECF subfamily.
  
     0.650
DSY2792
Hypothetical protein; Similarity to COG1595 DNA-directed RNA polymerase specialized sigma subunits, sigma24 homologs; Belongs to the sigma-70 factor family. ECF subfamily.
  
     0.625
DSY0167
Hypothetical protein; Similarity to COG1595 DNA-directed RNA polymerase specialized sigma subunits, sigma24 homologs; Belongs to the sigma-70 factor family. ECF subfamily.
  
     0.546
Your Current Organism:
Desulfitobacterium hafniense
NCBI taxonomy Id: 138119
Other names: D. hafniense Y51, Desulfitobacterium hafniense Y51, Desulfitobacterium hafniense str. Y51, Desulfitobacterium hafniense strain Y51, Desulfitobacterium sp. Y51
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.