STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pceBTetrachloroethene dehalogenase membrane bound subunit. (105 aa)    
Predicted Functional Partners:
pceA
Tetrachloroethene dehalogenase; Similarity to COG1600 Uncharacterized Fe-S protein.
     
 0.911
pceC
Putative regulatory protein; Similarity to COG0348 Polyferredoxin.
     
 0.784
pceT
Trigger factor; Similarity to COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor).
     
 0.741
DSY4425
Hypothetical protein; Similarity to COG0372 Citrate synthase(Evalue: 1E-142).
      
 0.560
DSY1102
Hypothetical protein; Similarity to COG1012 NAD-dependent aldehyde dehydrogenases(Evalue: 1E-145).
      
 0.420
Your Current Organism:
Desulfitobacterium hafniense
NCBI taxonomy Id: 138119
Other names: D. hafniense Y51, Desulfitobacterium hafniense Y51, Desulfitobacterium hafniense str. Y51, Desulfitobacterium hafniense strain Y51, Desulfitobacterium sp. Y51
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.