STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DSY2922Hypothetical protein; Similarity to COG0735 Fe2+/Zn2+ uptake regulation proteins(Evalue: 4E-38); Belongs to the Fur family. (144 aa)    
Predicted Functional Partners:
DSY2923
Hypothetical protein; Similarity to COG1145 Ferredoxin 2.
       0.773
DSY0524
Hypothetical protein; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily.
  
  
 0.611
DSY1478
Hypothetical protein; Similarity to COG1832 Predicted CoA-binding protein.
  
    0.603
def
Hypothetical protein; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.
  
    0.530
DSY1146
Hypothetical protein; Similarity to COG1773 Rubredoxin; Belongs to the rubredoxin family.
  
  
 0.528
DSY1147
Hypothetical protein; Similarity to COG1592 Rubrerythrin(Evalue: 2E-41).
  
  
 0.528
DSY2921
Hypothetical protein; Similarity to COG3250 Beta-galactosidase/beta-glucuronidase.
       0.522
sigA
Hypothetical protein; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.
  
 
 0.517
DSY3407
Hypothetical protein; Similarity to COG1592 Rubrerythrin(Evalue: 3E-33).
  
  
 0.512
DSY0917
Hypothetical protein.
  
    0.506
Your Current Organism:
Desulfitobacterium hafniense
NCBI taxonomy Id: 138119
Other names: D. hafniense Y51, Desulfitobacterium hafniense Y51, Desulfitobacterium hafniense str. Y51, Desulfitobacterium hafniense strain Y51, Desulfitobacterium sp. Y51
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.