STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DSY2967Hypothetical protein; Similarity to COG1191 DNA-directed RNA polymerase specialized sigma subunit(Evalue: 2E-47); Belongs to the sigma-70 factor family. (248 aa)    
Predicted Functional Partners:
DSY2962
Hypothetical protein; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.
 
 
 0.975
DSY3030
Hypothetical protein.
  
 0.974
DSY2982
Hypothetical protein; Similarity to COG1868 Flagellar motor switch protein(Evalue: 2E-81).
 
 
 0.958
DSY2965
Hypothetical protein; Similarity to COG1843 Flagellar hook capping protein.
 
  
 0.945
DSY2964
Hypothetical protein; Similarity to COG1749 Flagellar basal body and hook proteins(Evalue: 2E-66).
 
  
 0.942
flhA
Hypothetical protein; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family.
 
  
 0.927
DSY2991
Hypothetical protein; Similarity to COG1558 Flagellar basal body rod protein(Evalue: 7E-34).
 
 
 0.925
fliQ
Hypothetical protein; Role in flagellar biosynthesis. Belongs to the FliQ/MopD/SpaQ family.
 
  
 0.916
DSY2981
Similarity to COG1776 Chemotaxis protein CheC, inhibitor of MCP methylation(Evalue: 3E-51).
 
  
 0.916
cheD
Hypothetical protein; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family.
 
  
 0.914
Your Current Organism:
Desulfitobacterium hafniense
NCBI taxonomy Id: 138119
Other names: D. hafniense Y51, Desulfitobacterium hafniense Y51, Desulfitobacterium hafniense str. Y51, Desulfitobacterium hafniense strain Y51, Desulfitobacterium sp. Y51
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