STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DSY2971Hypothetical protein. (200 aa)    
Predicted Functional Partners:
DSY2970
Similarity to COG1776 Chemotaxis protein CheC, inhibitor of MCP methylation(Evalue: 2E-32).
 
    0.919
DSY2973
Hypothetical protein; Similarity to COG1419 Flagellar GTP-binding protein(Evalue: 5E-57).
 
  
 0.917
DSY2981
Similarity to COG1776 Chemotaxis protein CheC, inhibitor of MCP methylation(Evalue: 3E-51).
 
  
 0.885
cheD
Hypothetical protein; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family.
 
    0.870
DSY3000
Similarity to COG1516 Flagellar protein.
 
  
 0.869
DSY2967
Hypothetical protein; Similarity to COG1191 DNA-directed RNA polymerase specialized sigma subunit(Evalue: 2E-47); Belongs to the sigma-70 factor family.
  
  
 0.866
DSY2982
Hypothetical protein; Similarity to COG1868 Flagellar motor switch protein(Evalue: 2E-81).
 
 
 0.854
DSY2941
Hypothetical protein; Similarity to COG1315 Uncharacterized BCR.
 
    0.797
DSY3029
Hypothetical protein.
 
  
 0.793
DSY2965
Hypothetical protein; Similarity to COG1843 Flagellar hook capping protein.
  
  
 0.790
Your Current Organism:
Desulfitobacterium hafniense
NCBI taxonomy Id: 138119
Other names: D. hafniense Y51, Desulfitobacterium hafniense Y51, Desulfitobacterium hafniense str. Y51, Desulfitobacterium hafniense strain Y51, Desulfitobacterium sp. Y51
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.