STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DSY3019Hypothetical protein. (803 aa)    
Predicted Functional Partners:
DSY3011
Hypothetical protein; Similarity to COG1211 4-diphosphocytidyl-2-methyl-D-erithritol synthase; Belongs to the IspD/TarI cytidylyltransferase family. IspD subfamily.
  
  
 0.569
DSY3017
Hypothetical protein.
  
  
 0.561
DSY3018
Hypothetical protein.
       0.541
DSY3015
Hypothetical protein.
       0.519
DSY3016
Similarity to COG1882 Pyruvate-formate lyase(Evalue: 1E-105).
       0.519
DSY3014
Hypothetical protein; Similarity to COG0500 SAM-dependent methyltransferases.
  
    0.518
DSY3010
Hypothetical protein; Similarity to COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases(Evalue: 1E-36).
  
  
 0.502
DSY3013
Hypothetical protein; Similarity to COG0500 SAM-dependent methyltransferases.
  
    0.485
flgK
Hypothetical protein; Similarity to COG1256 Flagellar hook-associated protein(Evalue: 2E-74).
  
    0.465
DSY3012
Hypothetical protein; Similarity to COG0036 Pentose-5-phosphate-3-epimerase(Evalue: 3E-32).
       0.424
Your Current Organism:
Desulfitobacterium hafniense
NCBI taxonomy Id: 138119
Other names: D. hafniense Y51, Desulfitobacterium hafniense Y51, Desulfitobacterium hafniense str. Y51, Desulfitobacterium hafniense strain Y51, Desulfitobacterium sp. Y51
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.