STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DSY3463Hypothetical protein; Similarity to COG0534 Na+-driven multidrug efflux pump(Evalue: 4E-72). (472 aa)    
Predicted Functional Partners:
DSY3462
Hypothetical protein; Similarity to COG1309 Transcriptional regulator.
     
 0.557
DSY3465
Hypothetical protein; Similarity to COG1131 ABC-type multidrug transport system, ATPase component(Evalue: 3E-72).
  
  
 0.520
DSY3464
Hypothetical protein; Similarity to COG0842 ABC-type multidrug transport system, permease component.
  
  
 0.503
DSY1039
Hypothetical protein; Similarity to COG0671 Membrane-associated phospholipid phosphatase.
   
 
 0.484
DSY4452
Hypothetical protein.
   
 
 0.484
ispH
Hypothetical protein; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family.
  
  
 0.481
Your Current Organism:
Desulfitobacterium hafniense
NCBI taxonomy Id: 138119
Other names: D. hafniense Y51, Desulfitobacterium hafniense Y51, Desulfitobacterium hafniense str. Y51, Desulfitobacterium hafniense strain Y51, Desulfitobacterium sp. Y51
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