STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DSY3694Hypothetical protein; Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide. (202 aa)    
Predicted Functional Partners:
ddl-2
Hypothetical protein; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family.
 
  
 0.892
murF-2
Hypothetical protein; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily.
     
 0.697
DSY3692
Hypothetical protein; Similarity to COG2348 Uncharacterized protein involved in methicillin resistance(Evalue: 2E-22).
     
 0.523
DSY1937
Hypothetical protein; Similarity to COG2355 Zn-dependent dipeptidase, microsomal dipeptidase homolog(Evalue: 3E-50).
      0.506
DSY3691
Hypothetical protein; Similarity to COG2720 Uncharacterized BCR, vancomycin resistance protein(Evalue: 3E-27).
     
 0.480
DSY2126
Hypothetical protein; Similarity to COG3559 Putative exporter of polyketide antibiotics(Evalue: 5E-58).
  
     0.420
DSY0146
Hypothetical protein; Similarity to COG1181 D-alanine-D-alanine ligase and related ATP-grasp enzymes(Evalue: 2E-96).
     
 0.411
Your Current Organism:
Desulfitobacterium hafniense
NCBI taxonomy Id: 138119
Other names: D. hafniense Y51, Desulfitobacterium hafniense Y51, Desulfitobacterium hafniense str. Y51, Desulfitobacterium hafniense strain Y51, Desulfitobacterium sp. Y51
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.