STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DSY3719Putative oxidoreductase iron-sulfur subunit; Similarity to COG0437 Fe-S-cluster-containing hydrogenase components 1(Evalue: 2E-32). (178 aa)    
Predicted Functional Partners:
DSY3720
Similarity to COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing(Evalue: 1E-123); Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
   0.802
DSY2629
Iron-sulfur protein; Similarity to COG1142 Fe-S-cluster-containing hydrogenase components 2(Evalue: 6E-31).
 
   
 0.775
DSY3717
Putative oxidoreductase membrane subunit; Similarity to COG3301 Formate-dependent nitrite reductase, membrane component(Evalue: 2E-21).
  
  
 0.667
DSY3718
Similarity to COG3381 Uncharacterized component of anaerobic dehydrogenases.
  
    0.663
DSY3716
Putative oxidoreductase membrane subunit; Similarity to COG3301 Formate-dependent nitrite reductase, membrane component.
  
  
 0.639
DSY3722
Putative oxidoreductase membrane subunit; Similarity to COG3301 Formate-dependent nitrite reductase, membrane component.
  
 
 0.601
DSY3724
Similarity to COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing(Evalue: 1E-86); Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
   0.551
DSY3715
pceC like protein; Similarity to COG0348 Polyferredoxin.
  
  
 0.508
DSY3725
Similarity to COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing(Evalue: 2E-77); Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
   0.489
fdoI
Formate dehydrogenase gamma subunit; Cytochrome b556 subunit, similarity to COG2864 Cytochrome b subunit of formate dehydrogenase(Evalue: 3E-25).
  
 
 0.472
Your Current Organism:
Desulfitobacterium hafniense
NCBI taxonomy Id: 138119
Other names: D. hafniense Y51, Desulfitobacterium hafniense Y51, Desulfitobacterium hafniense str. Y51, Desulfitobacterium hafniense strain Y51, Desulfitobacterium sp. Y51
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