STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DSY3876Hypothetical protein; Similarity to COG0583 Transcriptional regulator(Evalue: 1E-40); Belongs to the LysR transcriptional regulatory family. (131 aa)    
Predicted Functional Partners:
DSY3877
Hypothetical protein; Similarity to COG0583 Transcriptional regulator(Evalue: 1E-46).
     0.994
DSY0949
Hypothetical protein; Similarity to COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.750
DSY3604
Hypothetical protein; Similarity to COG0583 Transcriptional regulator(Evalue: 1E-21); Belongs to the LysR transcriptional regulatory family.
  
     0.689
DSY0617
Hypothetical protein; Similarity to COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.652
DSY4225
Hypothetical protein; Similarity to COG0583 Transcriptional regulator(Evalue: 2E-24); Belongs to the LysR transcriptional regulatory family.
  
     0.635
DSY3878
Hypothetical protein; Similarity to COG0620 Methionine synthase II (cobalamin-independent)(Evalue: 1E-105).
 
  
 0.595
DSY5013
Hypothetical protein; Similarity to COG0583 Transcriptional regulator(Evalue: 9E-56); Belongs to the LysR transcriptional regulatory family.
  
     0.491
DSY0319
Hypothetical protein; Similarity to COG0583 Transcriptional regulator(Evalue: 3E-40); Belongs to the LysR transcriptional regulatory family.
  
     0.442
DSY4190
Hypothetical protein; Similarity to COG0583 Transcriptional regulator(Evalue: 8E-63); Belongs to the LysR transcriptional regulatory family.
  
     0.421
Your Current Organism:
Desulfitobacterium hafniense
NCBI taxonomy Id: 138119
Other names: D. hafniense Y51, Desulfitobacterium hafniense Y51, Desulfitobacterium hafniense str. Y51, Desulfitobacterium hafniense strain Y51, Desulfitobacterium sp. Y51
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.