Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DSY4591Hypothetical protein. (299 aa)    
Predicted Functional Partners:
DSY4590
Hypothetical protein; Similarity to COG1961 Site-specific recombinases, DNA invertase Pin homologs.
 
     0.860
DSY4592
Hypothetical protein; Similarity to COG1961 Site-specific recombinases, DNA invertase Pin homologs.
 
    
0.840
DSY3281
Hypothetical protein; Similarity to COG1961 Site-specific recombinases, DNA invertase Pin homologs.
  
     0.771
DSY4589
Hypothetical protein.
 
     0.745
DSY4645
Hypothetical protein.
  
     0.726
DSY4650
Hypothetical protein.
  
     0.704
DSY4546
Hypothetical protein.
  
     0.688
DSY0036
Hypothetical protein.
  
     0.626
DSY4643
Hypothetical protein.
  
     0.609
DSY4667
Hypothetical protein.
  
     0.587
Your Current Organism:
Desulfitobacterium hafniense
NCBI taxonomy Id: 138119
Other names: D. hafniense Y51, Desulfitobacterium hafniense Y51, Desulfitobacterium hafniense str. Y51, Desulfitobacterium hafniense strain Y51, Desulfitobacterium sp. Y51
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