STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DSY4602Putative oxidoreductase iron-sulfur subunit; Similarity to COG0437 Fe-S-cluster-containing hydrogenase components 1(Evalue: 4E-32). (175 aa)    
Predicted Functional Partners:
DSY4603
Similarity to COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing(Evalue: 1E-136); Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
   0.750
DSY4601
Similarity to COG3381 Uncharacterized component of anaerobic dehydrogenases.
  
    0.666
fdoI
Formate dehydrogenase gamma subunit; Cytochrome b556 subunit, similarity to COG2864 Cytochrome b subunit of formate dehydrogenase(Evalue: 3E-25).
  
 
 0.472
DSY2758
Hypothetical protein; Similarity to COG2864 Cytochrome b subunit of formate dehydrogenase.
  
 
 0.470
DSY2759
Hypothetical protein.
  
 
 0.470
fdnG
Formate dehydrogenase alpha subunit; Similarity to COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing(Evalue: 0).
 
 0.470
DSY3228
Hypothetical protein; Similarity to COG2864 Cytochrome b subunit of formate dehydrogenase.
  
 
 0.470
DSY3894
Putative oxidoreductase membrane subunit; Similarity to COG3301 Formate-dependent nitrite reductase, membrane component.
  
 
 0.420
DSY4710
Putative hydrogenase cytochrome b subunit.
 
 
 0.420
DSY4903
Putative oxidoreductase membrane subunit; Similarity to COG3301 Formate-dependent nitrite reductase, membrane component.
  
 
 0.420
Your Current Organism:
Desulfitobacterium hafniense
NCBI taxonomy Id: 138119
Other names: D. hafniense Y51, Desulfitobacterium hafniense Y51, Desulfitobacterium hafniense str. Y51, Desulfitobacterium hafniense strain Y51, Desulfitobacterium sp. Y51
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