STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DSY4666Hypothetical protein; Similarity to COG3266 Uncharacterized BCR. (1355 aa)    
Predicted Functional Partners:
DSY4667
Hypothetical protein.
 
     0.891
DSY4596
Hypothetical protein.
 
 
 0.784
DSY3431
Hypothetical protein.
 
 
 0.773
DSY4570
Hypothetical protein.
  
     0.765
DSY4662
Hypothetical protein; Similarity to COG0455 ATPases involved in chromosome partitioning.
 
     0.762
DSY4564
Hypothetical protein; Similarity to COG0455 ATPases involved in chromosome partitioning.
 
     0.759
DSY4557
Hypothetical protein.
  
     0.749
DSY4664
Hypothetical protein; Similarity to COG1989 Signal peptidase, cleaves prepilin-like proteins.
 
     0.736
DSY4660
Hypothetical protein.
 
     0.720
DSY4643
Hypothetical protein.
  
     0.708
Your Current Organism:
Desulfitobacterium hafniense
NCBI taxonomy Id: 138119
Other names: D. hafniense Y51, Desulfitobacterium hafniense Y51, Desulfitobacterium hafniense str. Y51, Desulfitobacterium hafniense strain Y51, Desulfitobacterium sp. Y51
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.