STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000803065_01104Unannotated protein. (183 aa)    
Predicted Functional Partners:
GCA_000803065_01105
Unannotated protein.
       0.885
GCA_000803065_01101
Unannotated protein.
       0.677
GCA_000803065_01103
Unannotated protein.
       0.625
GCA_000803065_01100
Unannotated protein.
       0.621
GCA_000803065_01102
Unannotated protein.
       0.620
GCA_000803065_01106
Unannotated protein.
  
    0.548
GCA_000803065_01107
Unannotated protein.
       0.528
GCA_000803065_00961
Unannotated protein.
    
  0.518
GCA_000803065_03766
Unannotated protein.
  
     0.489
GCA_000803065_01099
Unannotated protein.
       0.422
Your Current Organism:
Sphingomonas sp. ERG5
NCBI taxonomy Id: 1381597
Other names: S. sp. ERG5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.