STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000583215_00080Unannotated protein. (550 aa)    
Predicted Functional Partners:
GCA_000583215_00081
Unannotated protein.
       0.777
GCA_000583215_00082
Unannotated protein.
       0.777
GCA_000583215_00083
Unannotated protein.
       0.777
GCA_000583215_03110
Unannotated protein.
  
     0.772
GCA_000583215_03280
Unannotated protein.
  
     0.766
GCA_000583215_02563
Unannotated protein.
  
     0.746
GCA_000583215_01032
Unannotated protein.
  
     0.735
GCA_000583215_02035
Unannotated protein.
  
     0.730
GCA_000583215_00612
Unannotated protein.
  
     0.719
GCA_000583215_00352
Unannotated protein.
  
     0.717
Your Current Organism:
Brevibacterium sp. VCM10
NCBI taxonomy Id: 1381751
Other names: B. sp. VCM10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.