STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000586555_02249Unannotated protein. (152 aa)    
Predicted Functional Partners:
GCA_000586555_01108
Unannotated protein.
   
   0.829
GCA_000586555_02474
Unannotated protein.
  
     0.668
GCA_000586555_02494
Unannotated protein.
 
  
 0.653
GCA_000586555_02250
Unannotated protein.
       0.636
GCA_000586555_02092
Unannotated protein.
  
 
 0.609
GCA_000586555_02248
Unannotated protein.
       0.552
GCA_000586555_02246
Unannotated protein.
   
   0.550
GCA_000586555_02247
Unannotated protein.
       0.535
GCA_000586555_00077
Unannotated protein.
   
   0.526
GCA_000586555_00076
Unannotated protein.
   
   0.524
Your Current Organism:
Sporosarcina sp. D27
NCBI taxonomy Id: 1382305
Other names: S. sp. D27
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.