STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000702505_04057Unannotated protein. (319 aa)    
Predicted Functional Partners:
GCA_000702505_00943
Unannotated protein.
 
 
 0.917
GCA_000702505_00945
Unannotated protein.
 
 
 0.905
GCA_000702505_00642
Unannotated protein.
   
 
  0.881
GCA_000702505_00643
Unannotated protein.
   
 
  0.881
GCA_000702505_04381
Unannotated protein.
    
 0.865
GCA_000702505_03851
Unannotated protein.
  
  
  0.863
GCA_000702505_03850
Unannotated protein.
  
  
  0.862
GCA_000702505_02416
Unannotated protein.
 
 
 0.857
GCA_000702505_03320
Unannotated protein.
     
 0.857
GCA_000702505_04379
Unannotated protein.
     
 0.855
Your Current Organism:
Thermogemmatispora carboxidivorans
NCBI taxonomy Id: 1382306
Other names: ATCC BAA-2534, DSM 45816, T. carboxidivorans, Thermogemmatispora carboxidivorans King and King 2014, Thermogemmatispora sp. PM5, strain PM5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.