STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000744775_01810Unannotated protein. (352 aa)    
Predicted Functional Partners:
GCA_000744775_01809
Unannotated protein.
    
 0.896
GCA_000744775_00908
Unannotated protein.
   
 
  0.862
GCA_000744775_02587
Unannotated protein.
    
  0.861
GCA_000744775_01812
Unannotated protein.
       0.542
GCA_000744775_01811
Unannotated protein.
       0.532
GCA_000744775_01982
Unannotated protein.
    
  0.461
GCA_000744775_01652
Unannotated protein.
    
  0.416
GCA_000744775_01466
Unannotated protein.
 
   
 0.403
GCA_000744775_02535
Unannotated protein.
  
  
  0.400
Your Current Organism:
Thermorudis peleae
NCBI taxonomy Id: 1382356
Other names: ATCC BAA-2536, DSM 27169, T. peleae, Thermomicrobiales bacterium KI4, Thermorudis peleae King and King 2014 emend. Houghton et al. 2015, strain KI4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.