STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000744775_02317Unannotated protein. (297 aa)    
Predicted Functional Partners:
GCA_000744775_02117
Unannotated protein.
   
 0.999
GCA_000744775_02315
Unannotated protein.
 
 0.999
GCA_000744775_02316
Unannotated protein.
 0.999
GCA_000744775_02318
Unannotated protein.
 0.999
GCA_000744775_02319
Unannotated protein.
 
 0.999
GCA_000744775_02320
Unannotated protein.
 
 0.999
GCA_000744775_02321
Unannotated protein.
 
 0.999
GCA_000744775_02322
Unannotated protein.
 
 0.999
GCA_000744775_01359
Unannotated protein.
    
 0.976
GCA_000744775_01651
Unannotated protein.
   
 
 0.955
Your Current Organism:
Thermorudis peleae
NCBI taxonomy Id: 1382356
Other names: ATCC BAA-2536, DSM 27169, T. peleae, Thermomicrobiales bacterium KI4, Thermorudis peleae King and King 2014 emend. Houghton et al. 2015, strain KI4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.