STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W6MKT1_9ASCOUncharacterized protein. (972 aa)    
Predicted Functional Partners:
W6MIE0_9ASCO
Uncharacterized protein.
   
 0.973
W6MQ22_9ASCO
DNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family.
   
 0.970
W6ML47_9ASCO
Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism.
    
 0.965
W6MS24_9ASCO
Uncharacterized protein.
   
 0.954
W6MM33_9ASCO
RMI1_N domain-containing protein.
    
 0.946
W6MY48_9ASCO
Uncharacterized protein.
    
 0.933
W6MN51_9ASCO
ERCC4 domain-containing protein.
    
 0.919
W6MGD5_9ASCO
Ribosomal protein; Belongs to the universal ribosomal protein uL1 family.
    
 0.911
W6MST5_9ASCO
MPN domain-containing protein.
    
 0.903
W6MUQ4_9ASCO
Uncharacterized protein.
    
 
 0.893
Your Current Organism:
Kuraishia capsulata
NCBI taxonomy Id: 1382522
Other names: K. capsulata CBS 1993, Kuraishia capsulata CBS 1993, Kuraishia capsulata CBS1993
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.