Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KRO01586.1 | KRO01620.1 | IV60_GL001458 | IV60_GL001492 | Ferredoxin. | Lipoprotein. | 0.684 |
KRO01586.1 | KRO01918.1 | IV60_GL001458 | IV60_GL001165 | Ferredoxin. | Selenate reductase, YgfK subunit. | 0.956 |
KRO01586.1 | KRO01964.1 | IV60_GL001458 | IV60_GL001213 | Ferredoxin. | Purine nucleoside phosphorylase 1. | 0.889 |
KRO01586.1 | pdp | IV60_GL001458 | IV60_GL000764 | Ferredoxin. | Pyrimidine-nucleoside phosphorylase. | 0.893 |
KRO01586.1 | upp | IV60_GL001458 | IV60_GL000550 | Ferredoxin. | Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate. | 0.890 |
KRO01620.1 | KRO01586.1 | IV60_GL001492 | IV60_GL001458 | Lipoprotein. | Ferredoxin. | 0.684 |
KRO01620.1 | KRO01918.1 | IV60_GL001492 | IV60_GL001165 | Lipoprotein. | Selenate reductase, YgfK subunit. | 0.727 |
KRO01620.1 | KRO01964.1 | IV60_GL001492 | IV60_GL001213 | Lipoprotein. | Purine nucleoside phosphorylase 1. | 0.897 |
KRO01620.1 | cdd | IV60_GL001492 | IV60_GL000763 | Lipoprotein. | Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. | 0.900 |
KRO01620.1 | pdp | IV60_GL001492 | IV60_GL000764 | Lipoprotein. | Pyrimidine-nucleoside phosphorylase. | 0.899 |
KRO01620.1 | pyrR | IV60_GL001492 | IV60_GL000268 | Lipoprotein. | Bifunctional protein PyrR; Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant. | 0.909 |
KRO01918.1 | KRO01586.1 | IV60_GL001165 | IV60_GL001458 | Selenate reductase, YgfK subunit. | Ferredoxin. | 0.956 |
KRO01918.1 | KRO01620.1 | IV60_GL001165 | IV60_GL001492 | Selenate reductase, YgfK subunit. | Lipoprotein. | 0.727 |
KRO01918.1 | KRO01964.1 | IV60_GL001165 | IV60_GL001213 | Selenate reductase, YgfK subunit. | Purine nucleoside phosphorylase 1. | 0.840 |
KRO01918.1 | deoD | IV60_GL001165 | IV60_GL000758 | Selenate reductase, YgfK subunit. | Purine nucleoside phosphorylase. | 0.839 |
KRO01918.1 | pdp | IV60_GL001165 | IV60_GL000764 | Selenate reductase, YgfK subunit. | Pyrimidine-nucleoside phosphorylase. | 0.840 |
KRO01918.1 | upp | IV60_GL001165 | IV60_GL000550 | Selenate reductase, YgfK subunit. | Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate. | 0.837 |
KRO01964.1 | KRO01586.1 | IV60_GL001213 | IV60_GL001458 | Purine nucleoside phosphorylase 1. | Ferredoxin. | 0.889 |
KRO01964.1 | KRO01620.1 | IV60_GL001213 | IV60_GL001492 | Purine nucleoside phosphorylase 1. | Lipoprotein. | 0.897 |
KRO01964.1 | KRO01918.1 | IV60_GL001213 | IV60_GL001165 | Purine nucleoside phosphorylase 1. | Selenate reductase, YgfK subunit. | 0.840 |
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