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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRO02365.1Ascorbate-specific phosphotransferase enzyme iia component. (152 aa)    
Predicted Functional Partners:
KRO02366.1
Ascorbate-specific PTS system enzyme IIC.
 
 
 0.959
KRO02367.1
PTS system, lactose cellobiose-specific IIB component.
 
 
 0.937
KRO02439.1
Phosphotransferase system, lactose cellobiose-specific IIB subunit.
 
 
 0.865
KRO02438.1
Ascorbate-specific PTS system enzyme IIC.
 
 
 0.826
KRO03235.1
Heat-responsive suppressor hrsa.
  
 
 0.817
KRO02455.1
PTS system, fructose-specific enzyme II, BC component.
  
 
 0.817
KRO01781.1
Mannose-specific phosphotransferase system component iiab.
  
 
 0.759
gnd
6-phosphogluconate dehydrogenase.
       0.749
KRO02352.1
Pts system beta-glucoside-specific eiibca component.
   
 
 0.594
KRO01824.1
Hypothetical protein; Displays ATPase and GTPase activities.
  
  
 0.531
Your Current Organism:
Atopobium rimae
NCBI taxonomy Id: 1383
Other names: A. rimae, ATCC 49626, CCUG 31168, DSM 7090, IFO 15546, JCM 10299, LMG 11476, LMG:11476, Lactobacillus rimae, NBRC 15546, VPI D140H-11A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.