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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRO01802.1Serine threonine protein phosphatase. (267 aa)    
Predicted Functional Partners:
KRO02212.1
Integral membrane sensor signal transduction histidine kinase.
     
 0.915
KRO02128.1
Response regulator receiver domain protein.
  
  
  0.908
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
    
 0.862
KRO01620.1
Lipoprotein.
    
  0.851
KRO01803.1
Hypothetical protein.
 
    0.822
KRO02140.1
Phosphoesterase, PA-phosphatase related.
 
 
 0.594
KRO01805.1
Copper-transporting ATPase 2.
  
  
 0.558
KRO01801.1
T U mismatch-specific DNA glycosylase.
       0.549
KRO01804.1
Fructokinase.
  
    0.541
csoR
Copper-sensing transcriptional repressor CsoR.
       0.522
Your Current Organism:
Atopobium rimae
NCBI taxonomy Id: 1383
Other names: A. rimae, ATCC 49626, CCUG 31168, DSM 7090, IFO 15546, JCM 10299, LMG 11476, LMG:11476, Lactobacillus rimae, NBRC 15546, VPI D140H-11A
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