Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KRO01805.1Copper-transporting ATPase 2. (879 aa)    
Predicted Functional Partners:
csoR
Copper-sensing transcriptional repressor CsoR.
 
  
 0.915
KRO01949.1
Cation transport ATPase, HAD family.
 
 
0.807
cadA
Cadmium-translocating P-type ATPase.
 
 
0.798
KRO01804.1
Fructokinase.
       0.779
KRO03231.1
Peptidyl-prolyl cis-trans isomerase B; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
 
   0.740
KRO01946.1
Heavy metal transport detoxification protein.
  
 
 0.738
KRO02878.1
Regulatory protein, ArsR.
 
  
 0.680
nifJ
Pyruvate ferredoxin (flavodoxin) oxidoreductase.
  
  
 0.615
trxA
Thioredoxin; Belongs to the thioredoxin family.
 
  
 0.612
KRO01960.1
Glutaredoxin.
   
 
 0.611
Your Current Organism:
Atopobium rimae
NCBI taxonomy Id: 1383
Other names: A. rimae, ATCC 49626, CCUG 31168, DSM 7090, IFO 15546, JCM 10299, LMG 11476, LMG:11476, Lactobacillus rimae, NBRC 15546, VPI D140H-11A
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.