Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KRO01826.1ROK family protein. (334 aa)    
Predicted Functional Partners:
KRO02352.1
Pts system beta-glucoside-specific eiibca component.
  
 0.992
treP
Pts system, trehalose-specific iibc component.
  
 0.987
KRO01825.1
Bifunctional enzyme NanE nanK; Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N- acetylglucosamine-6-phosphate (GlcNAc-6-P).
 
 0.984
KRO01827.1
Dihydrodipicolinate synthase; Catalyzes the reversible aldol cleavage of N-acetylneuraminic acid (sialic acid; Neu5Ac) to form pyruvate and N-acetylmannosamine (ManNAc) via a Schiff base intermediate. Belongs to the DapA family.
 
 
 0.952
KRO02455.1
PTS system, fructose-specific enzyme II, BC component.
    
 0.923
KRO02526.1
Glucokinase, ROK family.
  
  
 
0.898
manB
Phosphoglucomutase phosphomannomutase family protein.
 
 
 0.887
pgi
Glucose-6-phosphate isomerase; Belongs to the GPI family.
    
 0.870
KRO01452.1
6-phospho-beta-galactosidase; Belongs to the glycosyl hydrolase 1 family.
  
 
 0.864
ptbA-2
Beta-glucoside-specific EII permease.
  
 
 0.863
Your Current Organism:
Atopobium rimae
NCBI taxonomy Id: 1383
Other names: A. rimae, ATCC 49626, CCUG 31168, DSM 7090, IFO 15546, JCM 10299, LMG 11476, LMG:11476, Lactobacillus rimae, NBRC 15546, VPI D140H-11A
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