STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CD29_01595UTP--glucose-1-phosphate uridylyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (294 aa)    
Predicted Functional Partners:
CD29_01585
Phosphoglucomutase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.892
CD29_16925
Capsular biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.847
CD29_14545
UDP-galactose-4-epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
 
  
 0.782
glmU
Glucosamine-1-phosphate N-acetyltransferase; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain.
 
  
 0.770
CD29_16975
UDP-glucose 4-epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
 
  
 0.745
CD29_07230
ATP-dependent DNA helicase PcrA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
      0.693
CD29_01420
Alpha-amlyase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.672
CD29_11265
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.656
CD29_16200
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.647
CD29_14540
Epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.636
Your Current Organism:
Lysinibacillus manganicus
NCBI taxonomy Id: 1384049
Other names: L. manganicus DSM 26584, Lysinibacillus manganicus DSM 26584, Lysinibacillus manganicus Mn1-7, Lysinibacillus sp. Mn1-7
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