STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB81454.1Precorrin-4 C(11)-methyltransferase; KEGG: pru:PRU_1088 3.4e-183 cobM; cobalamin biosynthesis protein CbiG/precorrin-4 C11-methyltransferase; Psort location: Cytoplasmic, score: 9.26. (586 aa)    
Predicted Functional Partners:
KXB81452.1
precorrin-3B C(17)-methyltransferase; KEGG: bhl:Bache_2216 5.2e-187 precorrin-3 methyltransferase; precorrin-8X methylmutase; Psort location: Cytoplasmic, score: 9.97.
 
 0.999
KXB81453.1
Precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit; KEGG: pru:PRU_1087 2.1e-119 cobL; precorrin-6Y C5,15-methyltransferase K00595; Psort location: Cytoplasmic, score: 9.97.
 
 0.999
cbiD
Cobalamin biosynthesis protein CbiD; Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A.
 
 
 0.999
KXB81345.1
Cobalt chelatase; KEGG: bfg:BF638R_2502 8.2e-47 putative cobalt chelatase; K02190 sirohydrochlorin cobaltochelatase.
 
 0.998
cobQ
Cobyric acid synthase CobQ; Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily.
 
  
 0.994
KXB82819.1
uroporphyrinogen-III synthase; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III.
  
 
 0.981
KXB83165.1
KEGG: pru:PRU_1086 5.3e-107 cobB; cobyrinic acid a,c-diamide synthase; K02224 cobyrinic acid a,c-diamide synthase; Psort location: Cytoplasmic, score: 9.97.
 
  
 0.967
cobD
Cobalamin biosynthesis protein CobD; Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group.
 
 
 0.951
KXB82820.1
Porphobilinogen deaminase, dipyromethane cofactor binding domain protein; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family.
 
  
 0.926
KXB85244.1
Putative adenosylcobalamin biosynthesis protein CobU; KEGG: bvu:BVU_3151 3.1e-63 cobinamide kinase; K02231 adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase; Psort location: Cytoplasmic, score: 9.26.
 
 
 0.918
Your Current Organism:
Prevotella sp. DNF00663
NCBI taxonomy Id: 1384078
Other names: P. sp. DNF00663
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