STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GL4_0382Outer membrane protein V. (283 aa)    
Predicted Functional Partners:
GL4_3164
Hypothetical protein.
  
     0.502
GL4_1538
Hypothetical protein.
  
     0.493
GL4_0903
Hypothetical protein.
  
     0.473
GL4_0880
Hypothetical protein.
  
     0.462
GL4_1390
Hypothetical protein.
  
     0.457
GL4_0237
Hypothetical protein.
  
     0.443
GL4_1595
Hypothetical protein.
  
     0.438
GL4_2457
Hypothetical protein.
  
     0.433
GL4_0487
Ferric siderophore transport system, periplasmic binding protein TonB.
  
     0.424
GL4_0433
Hypothetical protein.
  
     0.423
Your Current Organism:
Methyloceanibacter caenitepidi
NCBI taxonomy Id: 1384459
Other names: DSM 27242, M. caenitepidi, Methyloceanibacter caenitepidi Takeuchi et al. 2014, NBRC 109540, Rhizobiales bacterium Gela4, alpha proteobacterium Gela4, strain Gela4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.