Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KJB92761.1 | KJB95045.1 | N826_21475 | N826_06755 | Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.784 |
KJB95045.1 | KJB92761.1 | N826_06755 | N826_21475 | Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.784 |
KJB95045.1 | KJB95046.1 | N826_06755 | N826_06760 | Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Long-chain fatty acid--CoA ligase; Activates fatty acids by binding to coenzyme A; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.431 |
KJB95045.1 | KJB95332.1 | N826_06755 | N826_05660 | Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Cysteine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.527 |
KJB95045.1 | KJB97230.1 | N826_06755 | N826_00015 | Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Biopolymer transporter ExbB; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.422 |
KJB95045.1 | tolQ | N826_06755 | N826_17015 | Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Biopolymer transporter ExbB; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity. | 0.422 |
KJB95046.1 | KJB95045.1 | N826_06760 | N826_06755 | Long-chain fatty acid--CoA ligase; Activates fatty acids by binding to coenzyme A; Derived by automated computational analysis using gene prediction method: Protein Homology. | Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.431 |
KJB95332.1 | KJB95045.1 | N826_05660 | N826_06755 | Cysteine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.527 |
KJB97230.1 | KJB95045.1 | N826_00015 | N826_06755 | Biopolymer transporter ExbB; Derived by automated computational analysis using gene prediction method: Protein Homology. | Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.422 |
tolQ | KJB95045.1 | N826_17015 | N826_06755 | Biopolymer transporter ExbB; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity. | Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.422 |