STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KJB94578.1Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (520 aa)    
Predicted Functional Partners:
KJB92071.1
Bacteriochlorophyll 4-vinyl reductase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 
 0.782
KJB96341.1
Heme NO binding domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.782
KJB94579.1
Esterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.701
KJB96107.1
2-vinyl bacteriochlorophyllide hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.680
KJB90187.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 
 0.600
KJB93276.1
Polyphosphate kinase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
    0.567
KJB92970.1
Polyphosphate kinase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
    0.567
KJB96059.1
UDP-galactose-lipid carrier transferase MED92; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.567
KJB93514.1
Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.505
KJB94623.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.491
Your Current Organism:
Skermanella aerolata
NCBI taxonomy Id: 1385368
Other names: S. aerolata KACC 11604, Skermanella aerolata 5416T-32, Skermanella aerolata DSM 18479, Skermanella aerolata KACC 11604
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.