STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KJB94135.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (372 aa)    
Predicted Functional Partners:
KJB94134.1
Glycosyl transferase family 1; Derived by automated computational analysis using gene prediction method: Protein Homology.
    0.955
KJB94133.1
Epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.888
KJB94132.1
Dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.885
KJB94136.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    
0.874
KJB94137.1
Glycosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    
0.868
KJB96878.1
Beta-xylosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.801
KJB96877.1
SAM-dependent methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.792
KJB92460.1
Zn-containing dehydrogenase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
     0.783
KJB89939.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
     0.781
KJB92459.1
Oxidoreductase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
     0.777
Your Current Organism:
Skermanella aerolata
NCBI taxonomy Id: 1385368
Other names: S. aerolata KACC 11604, Skermanella aerolata 5416T-32, Skermanella aerolata DSM 18479, Skermanella aerolata KACC 11604
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.