STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KJB92249.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (259 aa)    
Predicted Functional Partners:
KJB92240.1
acyl-CoA synthetase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
     0.978
KJB92250.1
Acyltransferase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
   
 0.950
KJB92251.1
Non-heme halogenase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
   
 0.948
KJB92243.1
Polysaccharide deacetylase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 
 0.827
KJB92242.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
    0.794
KJB92236.1
Acyl carrier protein; Involved in the biosynthetic pathways of fatty acids, phospholipids, lipopolysaccharides, and oligosaccharides; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
    0.793
KJB92238.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
   
 0.790
KJB92241.1
Hypothetical protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).
 
    0.789
KJB92246.1
3-oxoacyl-ACP synthase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
     0.789
KJB92247.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
     0.788
Your Current Organism:
Skermanella aerolata
NCBI taxonomy Id: 1385368
Other names: S. aerolata KACC 11604, Skermanella aerolata 5416T-32, Skermanella aerolata DSM 18479, Skermanella aerolata KACC 11604
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.