STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KJB90896.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (293 aa)    
Predicted Functional Partners:
KJB96125.1
Photosynthetic reaction center subunit M; The reaction center is a membrane-bound complex that mediates the initial photochemical event in the electron transfer process of photosynthesis.
   
 0.986
KJB96126.1
Photosynthetic reaction center subunit L; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the reaction center PufL/M/PsbA/D family.
   
 0.984
KJB96124.1
Photosynthetic reaction center cytochrome C subunit; The reaction center of purple bacteria contains a tightly bound cytochrome molecule which re-reduces the photo oxidized primary electron donor.
   
 0.980
KJB90895.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
     0.974
KJB96127.1
Hypothetical protein; Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers.
   
 0.970
KJB96128.1
Hypothetical protein; Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers.
    
 0.969
KJB97799.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
  0.858
KJB93427.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.858
KJB91478.1
Photosystem reaction center subunit H; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.858
KJB96058.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.858
Your Current Organism:
Skermanella aerolata
NCBI taxonomy Id: 1385368
Other names: S. aerolata KACC 11604, Skermanella aerolata 5416T-32, Skermanella aerolata DSM 18479, Skermanella aerolata KACC 11604
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.