STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KJB91038.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (792 aa)    
Predicted Functional Partners:
KJB90301.1
ATP synthase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 
 0.939
atpD
F0F1 ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.
     
 0.860
KJB94252.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
  
 0.853
KJB90278.1
General secretion pathway protein G; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
  
 0.853
KJB94175.1
General secretion pathway protein G; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.852
KJB91044.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
  
 0.831
KJB94179.1
General secretion pathway protein E; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.828
KJB94248.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
   
 0.827
KJB94177.1
General secretion pathway protein K; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.814
KJB94247.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
  
 0.810
Your Current Organism:
Skermanella aerolata
NCBI taxonomy Id: 1385368
Other names: S. aerolata KACC 11604, Skermanella aerolata 5416T-32, Skermanella aerolata DSM 18479, Skermanella aerolata KACC 11604
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.