STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KJB96616.1GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (250 aa)    
Predicted Functional Partners:
KJB97448.1
GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.775
KJB93144.1
GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.775
KJB96614.1
GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
  
 0.775
KJB97519.1
GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.774
KJB96615.1
enoyl-CoA hydratase; Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.773
KJB96617.1
Lactate dehydrogenase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.773
KJB94495.1
GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.746
KJB91446.1
GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.676
KJB96730.1
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.672
KJB96411.1
Acetolactate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.431
Your Current Organism:
Skermanella aerolata
NCBI taxonomy Id: 1385368
Other names: S. aerolata KACC 11604, Skermanella aerolata 5416T-32, Skermanella aerolata DSM 18479, Skermanella aerolata KACC 11604
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.