STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KJB96737.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (233 aa)    
Predicted Functional Partners:
KJB96736.1
Selenium-binding protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
     0.921
KJB94018.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
 0.918
KJB90401.1
Cytochrome C biogenesis protein CcsA; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
 0.914
KJB94436.1
Cytochrome C oxidase subunit II; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 
 0.836
KJB94718.1
Cytochrome C oxidase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 
 0.796
KJB95013.1
Ubiquinol oxidase subunit II; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.769
KJB92735.1
Cytochrome C oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
  
 
 0.769
KJB95595.1
Thiol oxidoreductase DsbE; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.764
KJB96249.1
Alkyl hydroperoxide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.758
KJB93865.1
Redox-active disulfide protein 2; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.734
Your Current Organism:
Skermanella aerolata
NCBI taxonomy Id: 1385368
Other names: S. aerolata KACC 11604, Skermanella aerolata 5416T-32, Skermanella aerolata DSM 18479, Skermanella aerolata KACC 11604
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