STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KGP92103.1Patatin; Derived by automated computational analysis using gene prediction method: Protein Homology. (292 aa)    
Predicted Functional Partners:
KGP92104.1
Catalyzes the transamination of the aromatic amino acid forming a ketoacid; first step in aromatic amino acid degradation in lactococci; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.462
KGP92346.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.458
KGP92349.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
    0.430
KGP90919.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.430
KGP90539.1
Anti-sigma factor antagonist; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.430
KGP90163.1
DeoR faimly transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.430
KGP89838.1
Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.430
KGP91462.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.430
Your Current Organism:
Pontibacillus chungwhensis
NCBI taxonomy Id: 1385513
Other names: P. chungwhensis BH030062, Pontibacillus chungwhensis BH030062
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.